CDS

Accession Number TCMCG073C04532
gbkey CDS
Protein Id XP_010527779.1
Location complement(join(80098..80190,80297..80869,80993..81076,81198..81356,81606..81749,81827..81979,82167..82238,82387..82620,82743..82832,82960..83041,83638..83801,84093..84333,84581..84693,84781..85314,85443..85578,85656..85690,85805..85843))
Gene LOC104805066
GeneID 104805066
Organism Tarenaya hassleriana

Protein

Length 981aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010529477.1
Definition PREDICTED: ATP-dependent DNA helicase homolog RECG, chloroplastic isoform X2 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category A
Description helicase superfamily c-terminal domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03655        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03440        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
GOs GO:0000002        [VIEW IN EMBL-EBI]
GO:0000266        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033955        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048285        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGTGGCTCTATCCGTAGTTGAACCGTGTGGCATGAGAGGATATTGGAGTAGGATGAGTGGGAAAACGAGGTTGGGTCATTTCTTGCTCTCCAATGTGTGGAACATCTCTTGTCGGTCGAAGCACAAGTTTTCTGAGAATTTTCTTGAAGAAGTCGACAAGTATGCCGCAGCAAGGGTCCCGGACAAGTCAAAGTTGCTCAGTAAGGTAGCAGCTTTGATGGAGTATGATGGCATGGACGATTTCATTGAGAAAGGAAATTTTGATAAGAAATATGATGAGCAACTAAAAACTGATGCTGCATTGGCGTGTAAGAGGTTCCCTTCTATTGTTCTTGGCGATTCTCCTCCAGTGGAACTATACGACGACAACGTGTCTTTCCCAAAATCAAGGAGCATTTTGAACTCACCAGCAAATAACGGTTTTCTTCCCAGCTCCATGCATGTAGGGTGGATTGATCCGGCCGATCTTTCTGAGCCATTATCTTCCTTGTGTCCAGAGCTTGACAATGTCGATGACCAAGAAGAAAAATCAACTGGTTCTCCTCTTGCCGGTCAAGCTGTGATCCCAGAAGCAGTTGCAATATCAGATGATTCTGACTATGTAATCACGTCTATTGAAGAGTGTGAACTACAACATACTGGTCTTGCCTCCGAGTTTTTTCTTGATAGTTCGATAAGTTTTATACCTAGATTAAGTAAGAGGAACTATAATCAGCTGGAGAGCTGCGGCTTTCACACGATGAGGAAACTGTTGCACCATTTTCCTCGAACTTATGCAGATTTGCAGAATGCACAAGTTGATATCAGAGATGGACAGTATTTAATATTTGTCGGCAAAATCTTGTCTTCCAGGGGAGTCAGAGCTGGTTCTTCATTTTCATTTCTTGAGGTTATTGTCAGTTCTGAGATTTCAGGCAGAGACAAAACTCCAGTGAATCTGAATCTGAATTTTGATGCTGACAACGAAGAAAAGAGAATAATTTATTTGCATCTCAAAAAGTTTTTCCGTGGTACACGCTTTGTTTATCAACCTTTTCTCAAAAGTCTTCAGGAGAAACATAGACCAGGAGACCTTGTATGTGTTAGTGGGAAGGTGAAGACCTTGCATGCAGAAGATCACTTTGAGATTAGGGAATACAATATCGATGTACTCAAAGATGAGAAGGAATCATCTCTTCGAACCCAGGGGAGACCATATCCCATATACCCGTCGAAAGGAGGTCTGAATGCAAACTTTCTTAGAGATATCATTGCCAGGGCTTTGCAAGTTTTGCCTGTCAATATTGATCCTATACCTTATGAAATCACTAAAGTTTTTGGTCTTCCGTCTCTTCATAATGCATATATCGGTATTCACCAGCCGAAGAATTTAGATGAGGCTGATTTAGCTCGCAAAAGACTTATATTCGATGAGTTCTTTTACCTACAGTTGGGACGCTTGTACCAAATGCTTCAAGGCCTTGGCACAAAAATAGAGAAAGATGTATTGCTGGATAAGTTTAGGAAGCCAGTGTTAAATTCTGTTTTTATGGAAGGATGGTCCATTCTCACCAAGAGTTTTCTGAAGGCTCTACCATATTCCCTTACCCCTAGCCAGCTAAGTGCTGTATCAGAAATAATATGGGATCTAAAGCGTCCAGTTCCAATGAATCGCCTTTTGCAGGGTGATGTTGGTTGTGGAAAAACTGTAGTTGCTTTCTTGGCATGCATGGAGGTCGTAGGATCTGGGTACCAGGCAGCGTTCATGGTCCCCACAGAACTGCTTGCCATTCAGCATTATGAGCACTTGCGGGATCTGCTAGACAATATGGAGGAGGTTGCATACAAGCCAACCATTGCGCTGCTTACAGGTTCAACCTCGGCAAAACAGTCAAGAATGATTCGTCAGGATCTCCAAACGGGAGCTATCTCAATTGTAATTGGAACTCATAGTCTGATTGCTGAAAAGATAGAGTTCTCTGCATTACGTATTGCTGTGGTTGACGAACAGCACCGGTTTGGTGTCATCCAGAGAGGAAGATTTAACAGCAAGTTGTATGGCACCTCAATGATATCCAAAACCACTTCAGATGACTTGGATGGAACTTCTAAAGCTGGTTACCACATGGCTCCTCATGTTCTCGCAATGTCAGCCACCCCTATCCCGAGGTCACTTGCCTTAGCTTTATATGGAGACATATCGTTGACTCAAATTACTGGTTTGCCTCCAGGAAGAATACCGGTTGAAACATACATTTTTGAAGGAAATGAAGATGGCTTTGAGAAAGTCTACTCTATGATGCTGGTTGAACTTAAATCTGGAGGGAAAGTGTACCTTGTTTATCCTGTTATTGAACAATCAGAGCAACTGCCTCAGCTTCGCGCTGCCTCTGCAGAACTCGAATCTATATCTGGTAGATTTCCAGAGTATAGCTGTGGACTATTACATGGAAAGATGAAGAGTGATGAAAAAGAAGAGGCTCTGAGAAATTTCAGATGTGGAGAGACACAGATACTGCTCTCCACACAGGTGATCGAGATAGGAGTTGACGTTCCGGATGCCTCCATGATGGTTGTGATGAATGCTGAAAGATTCGGAATTGCTCAGTTACACCAACTCAGAGGGCGGGTTGGTCGCGGAACTAGAAAATCGAAATGCTTATTAATAGGGTCAAGTGTCAACAGCCTAAGCCGGTTGAAGGTGTTGGAGAAATCGTCAGATGGGTTTTACTTGGCAAATATAGACCTCCTTCTGCGTGGACCAGGCGATTTACTTGGAAAAAAACAATCTGGACACTTGCCCGAGTTCCCAGTTGCTAGGCTGGAAATAGACGGGAATATTCTACAAGAAGCCCATGTTGCCGCATTGAAAGTTCTAGGGGATTCTCACGACCTGGAGAAGTTCCCAGGGCTCAAAGCTGAGCTTAGCATGAGACAGCCACTTTCTCTTCTTGGCGACTAA
Protein:  
MAVALSVVEPCGMRGYWSRMSGKTRLGHFLLSNVWNISCRSKHKFSENFLEEVDKYAAARVPDKSKLLSKVAALMEYDGMDDFIEKGNFDKKYDEQLKTDAALACKRFPSIVLGDSPPVELYDDNVSFPKSRSILNSPANNGFLPSSMHVGWIDPADLSEPLSSLCPELDNVDDQEEKSTGSPLAGQAVIPEAVAISDDSDYVITSIEECELQHTGLASEFFLDSSISFIPRLSKRNYNQLESCGFHTMRKLLHHFPRTYADLQNAQVDIRDGQYLIFVGKILSSRGVRAGSSFSFLEVIVSSEISGRDKTPVNLNLNFDADNEEKRIIYLHLKKFFRGTRFVYQPFLKSLQEKHRPGDLVCVSGKVKTLHAEDHFEIREYNIDVLKDEKESSLRTQGRPYPIYPSKGGLNANFLRDIIARALQVLPVNIDPIPYEITKVFGLPSLHNAYIGIHQPKNLDEADLARKRLIFDEFFYLQLGRLYQMLQGLGTKIEKDVLLDKFRKPVLNSVFMEGWSILTKSFLKALPYSLTPSQLSAVSEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVVGSGYQAAFMVPTELLAIQHYEHLRDLLDNMEEVAYKPTIALLTGSTSAKQSRMIRQDLQTGAISIVIGTHSLIAEKIEFSALRIAVVDEQHRFGVIQRGRFNSKLYGTSMISKTTSDDLDGTSKAGYHMAPHVLAMSATPIPRSLALALYGDISLTQITGLPPGRIPVETYIFEGNEDGFEKVYSMMLVELKSGGKVYLVYPVIEQSEQLPQLRAASAELESISGRFPEYSCGLLHGKMKSDEKEEALRNFRCGETQILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTRKSKCLLIGSSVNSLSRLKVLEKSSDGFYLANIDLLLRGPGDLLGKKQSGHLPEFPVARLEIDGNILQEAHVAALKVLGDSHDLEKFPGLKAELSMRQPLSLLGD